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- SNP
- rs62078878[chr17:42101972]
Enhancers that have rs62078878[chr17:42101972]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
42101631 |
42102033 |
vista24865 |
|
|
Transcript factors that have rs62078878[chr17:42101972]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
42100745
|
42102324
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261730
|
|
|
chr17
|
42100745
|
42102324
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261731
|
|
|
chr17
|
42101003
|
42102487
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261732
|
|
|
chr17
|
42101084
|
42102329
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261733
|
|
|
chr17
|
42101085
|
42102431
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261734
|
|
|
chr17
|
42101109
|
42102316
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108261735
|
|
|
chr17
|
42101152
|
42102472
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261736
|
|
|
chr17
|
42101163
|
42102363
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261737
|
|
|
chr17
|
42101200
|
42102266
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261738
|
|
|
chr17
|
42101202
|
42102213
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261739
|
|
|
chr17
|
42101213
|
42102421
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261740
|
|
|
chr17
|
42101228
|
42102215
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261741
|
|
|
chr17
|
42101229
|
42102083
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261742
|
|
|
chr17
|
42101242
|
42102322
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261743
|
|
|
chr17
|
42101244
|
42102173
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261744
|
|
|
chr17
|
42101247
|
42102258
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261745
|
|
|
chr17
|
42101254
|
42102115
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261746
|
|
|
chr17
|
42101258
|
42101990
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261747
|
|
|
chr17
|
42101300
|
42102230
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108261748
|
|
|
chr17
|
42101300
|
42102361
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261749
|
|
|
chr17
|
42101302
|
42102177
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261750
|
|
|
chr17
|
42101306
|
42102288
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261751
|
|
|
chr17
|
42101310
|
42102435
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261752
|
|
|
chr17
|
42101328
|
42102151
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261754
|
|
|
chr17
|
42101330
|
42102293
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261755
|
|
|
chr17
|
42101335
|
42102453
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261756
|
|
|
chr17
|
42101349
|
42102045
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261757
|
|
|
chr17
|
42101350
|
42102118
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261758
|
|
|
chr17
|
42101352
|
42102128
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261759
|
|
|
chr17
|
42101353
|
42102217
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261760
|
|
|
chr17
|
42101354
|
42102109
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261761
|
|
|
chr17
|
42101354
|
42102296
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261762
|
|
|
chr17
|
42101356
|
42102465
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261763
|
|
|
chr17
|
42101357
|
42102282
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261764
|
|
|
chr17
|
42101358
|
42101985
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261765
|
|
|
chr17
|
42101365
|
42102309
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261767
|
|
|
chr17
|
42101367
|
42102083
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261768
|
|
|
chr17
|
42101367
|
42102374
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261769
|
|
|
chr17
|
42101370
|
42102007
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261770
|
|
|
chr17
|
42101370
|
42102040
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261771
|
|
|
chr17
|
42101372
|
42102029
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261772
|
|
|
chr17
|
42101373
|
42102288
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261773
|
|
|
chr17
|
42101380
|
42102108
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261774
|
|
|
chr17
|
42101395
|
42102152
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261777
|
|
|
chr17
|
42101397
|
42102111
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108261778
|
|
|
chr17
|
42101401
|
42102196
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261779
|
|
|
chr17
|
42101406
|
42102106
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261780
|
|
|
chr17
|
42101406
|
42102491
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261781
|
|
|
chr17
|
42101407
|
42102040
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108261782
|
|
|
chr17
|
42101409
|
42102053
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261783
|
|
|
chr17
|
42101414
|
42102030
|
CTCF
|
GTRD
|
no
|
Spleen
|
108261785
|
|
|
chr17
|
42101416
|
42102273
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261786
|
|
|
chr17
|
42101421
|
42101998
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261788
|
|
|
chr17
|
42101421
|
42102039
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261789
|
|
|
chr17
|
42101422
|
42102080
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261790
|
|
|
chr17
|
42101424
|
42102031
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261791
|
|
|
chr17
|
42101431
|
42102178
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261792
|
|
|
chr17
|
42101433
|
42102034
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261793
|
|
|
chr17
|
42101433
|
42102084
|
CTCF
|
GTRD
|
no
|
Lung
|
108261794
|
|
|
chr17
|
42101434
|
42102077
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261795
|
|
|
chr17
|
42101435
|
42102323
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261796
|
|
|
chr17
|
42101439
|
42102043
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261797
|
|
|
chr17
|
42101441
|
42102068
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261799
|
|
|
chr17
|
42101442
|
42102005
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261800
|
|
|
chr17
|
42101447
|
42102640
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261801
|
|
|
chr17
|
42101448
|
42101992
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261802
|
|
|
chr17
|
42101451
|
42102166
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261803
|
|
|
chr17
|
42101457
|
42102139
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261804
|
|
|
chr17
|
42101461
|
42102085
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261806
|
|
|
chr17
|
42101464
|
42102050
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261809
|
|
|
chr17
|
42101465
|
42102183
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261810
|
|
|
chr17
|
42101467
|
42102068
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261812
|
|
|
chr17
|
42101477
|
42102009
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261814
|
|
|
chr17
|
42101478
|
42102053
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108261816
|
|
|
chr17
|
42101478
|
42102138
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261817
|
|
|
chr17
|
42101484
|
42102098
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261820
|
|
|
chr17
|
42101486
|
42102030
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108261821
|
|
|
chr17
|
42101487
|
42102680
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261822
|
|
|
chr17
|
42101489
|
42102428
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261823
|
|
|
chr17
|
42101497
|
42102534
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261824
|
|
|
chr17
|
42101498
|
42102219
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261825
|
|
|
chr17
|
42101517
|
42102082
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261828
|
|
|
chr17
|
42101518
|
42102082
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108261829
|
|
|
chr17
|
42101529
|
42102621
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261833
|
|
|
chr17
|
42101538
|
42102060
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261837
|
|
|
chr17
|
42101565
|
42102087
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108261839
|
|
|
chr17
|
42101683
|
42102704
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108261845
|
|
|
chr17
|
42101690
|
42102203
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108261846
|
|
|
chr17
|
42101715
|
42101978
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108261847
|
|
Genes associated with rs62078878[chr17:42101972], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |