EnhancerDB
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  3. rs62129468[chr19:1944342]
Enhancers that have rs62129468[chr19:1944342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1941720 1950194 enh17846
Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (T-cell)
Transcript factors that have rs62129468[chr19:1944342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 21834083
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355816
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355817
chr19 1939455 1946523 TCF7L2 GTRD no Colon (HCT116) 108355818
chr19 1941379 1944629 ZNF274 GTRD no Blood (GM12878) 108355860
chr19 1941379 1944629 ZNF274 GTRD no Blood (GM12878) 108355861
chr19 1941379 1944629 ZNF274 GTRD no Blood (GM12878) 108355862
chr19 1941523 1944696 ZNF274 GTRD no Blood (GM12878) 108355883
chr19 1941523 1944696 ZNF274 GTRD no Blood (GM12878) 108355884
chr19 1941523 1944696 ZNF274 GTRD no Blood (GM12878) 108355885
chr19 1944340 1944353 ELF1 JASPAR yes 112038282
chr19 1944340 1944354 SPI1 JASPAR yes 112038283
chr19 1944340 1944354 SPIC JASPAR yes 112038284
Genes associated with rs62129468[chr19:1944342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 2427636 2456994 - LMNB2 ENSG00000176619.6 2456994 483294 Lung 0.270628 16784