EnhancerDB
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Enhancers that have rs622780[chr16:85749373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85746708 85760055 enh16876
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Breast Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs622780[chr16:85749373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85748962 85752038 ZNF143 GTRD no Epithelial (MCF-7) 21730871
chr16 85748962 85752038 ZNF143 GTRD no Epithelial (MCF-7) 108216959
chr16 85749179 85752089 TCF7L2 GTRD no Colon (HCT116) 108216960
chr16 85749189 85752083 TCF7L2 GTRD no Colon (HCT116) 108216961
chr16 85749192 85754767 ZNF143 GTRD no Epithelial (MCF-7) 21730872
chr16 85749192 85754767 ZNF143 GTRD no Epithelial (MCF-7) 108216962
chr16 85749292 85755128 ZNF143 GTRD no Epithelial (MCF-7) 21730873
chr16 85749292 85755128 ZNF143 GTRD no Epithelial (MCF-7) 108216963
chr16 85749336 85751602 ZNF143 GTRD no Epithelial (MCF-7) 21730874
chr16 85749336 85751602 ZNF143 GTRD no Epithelial (MCF-7) 108216964
chr16 85749337 85753743 ZNF143 GTRD no Epithelial (MCF-7) 21730875
chr16 85749337 85753743 ZNF143 GTRD no Epithelial (MCF-7) 108216965
chr16 85749346 85752051 ZNF143 GTRD no Epithelial (MCF-7) 21730876
chr16 85749346 85752051 ZNF143 GTRD no Epithelial (MCF-7) 108216966
chr16 85749350 85751393 ZNF143 GTRD no Epithelial (MCF-7) 21730877
chr16 85749350 85751393 ZNF143 GTRD no Epithelial (MCF-7) 108216967
chr16 85749368 85753624 ZNF143 GTRD no Epithelial (MCF-7) 21730878
chr16 85749368 85753624 ZNF143 GTRD no Epithelial (MCF-7) 108216968
Genes associated with rs622780[chr16:85749373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More