EnhancerDB
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  3. rs6428868[chr1:116737009]
Enhancers that have rs6428868[chr1:116737009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116735525 116740395 enh95899
Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs6428868[chr1:116737009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116736495 116738003 ZNF143 GTRD no Epithelial (MCF-7) 21331692
chr1 116736519 116737915 ZNF143 GTRD no Epithelial (MCF-7) 21331693
chr1 116736589 116737821 ZNF143 GTRD no Epithelial (MCF-7) 21331694
chr1 116736597 116737819 ZNF143 GTRD no Epithelial (MCF-7) 21331695
chr1 116736646 116737242 ZNF143 GTRD no Epithelial (MCF-7) 21331696
chr1 116736880 116738053 ZNF143 GTRD no Epithelial (MCF-7) 21331697
chr1 116737000 116737016 RFX2 JASPAR yes 31780534
chr1 116737000 116737016 RFX3 JASPAR yes 31780535
chr1 116737000 116737016 RFX4 JASPAR yes 31780536
chr1 116737001 116737012 STAT1 JASPAR yes 31780537
chr1 116737002 116737017 MEF2C JASPAR yes 31780538
chr1 116737003 116737018 MEF2A JASPAR yes 31780539
Genes associated with rs6428868[chr1:116737009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More