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- rs6540096[chr16:87932604]
Enhancers that have rs6540096[chr16:87932604]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
87927161 |
87933450 |
enh47983 |
|
|
Transcript factors that have rs6540096[chr16:87932604]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
87931317
|
87932779
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221568
|
|
|
chr16
|
87931414
|
87932851
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221578
|
|
|
chr16
|
87931416
|
87932779
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108221579
|
|
|
chr16
|
87931465
|
87932727
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108221586
|
|
|
chr16
|
87932599
|
87932607
|
ISL2
|
JASPAR
|
yes
|
|
12250640
|
|
|
chr16
|
87932599
|
87932608
|
NKX3-2
|
JASPAR
|
yes
|
|
12250641
|
|
|
chr16
|
87932601
|
87932615
|
NR2F1
|
JASPAR
|
yes
|
|
12250642
|
|
Genes associated with rs6540096[chr16:87932604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |