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- rs6540227[chr16:85879325]
Enhancers that have rs6540227[chr16:85879325]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
85876485 |
85880635 |
enh47982 |
|
|
Transcript factors that have rs6540227[chr16:85879325]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
85878148
|
85882476
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108217222
|
|
|
chr16
|
85878297
|
85879763
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
108217223
|
|
|
chr16
|
85879315
|
85879329
|
PLAG1
|
JASPAR
|
yes
|
|
12100353
|
|
|
chr16
|
85879322
|
85879327
|
SP1
|
TRANSFAC
|
yes
|
|
12100354
|
|
|
chr16
|
85879323
|
85879328
|
SP1
|
TRANSFAC
|
yes
|
|
12100355
|
|
Genes associated with rs6540227[chr16:85879325], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |