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- rs6565540[chr17:79124534]
Enhancers that have rs6565540[chr17:79124534]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
79124157 |
79124867 |
vista26384 |
|
|
Transcript factors that have rs6565540[chr17:79124534]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
79123898
|
79127080
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308758
|
|
|
chr17
|
79123898
|
79127080
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308759
|
|
|
chr17
|
79124279
|
79126975
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308760
|
|
|
chr17
|
79124279
|
79126975
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308761
|
|
|
chr17
|
79124315
|
79127140
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308762
|
|
|
chr17
|
79124315
|
79127140
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308763
|
|
|
chr17
|
79124390
|
79127488
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308764
|
|
|
chr17
|
79124390
|
79127488
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308765
|
|
|
chr17
|
79124390
|
79127488
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308766
|
|
|
chr17
|
79124417
|
79127322
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308767
|
|
|
chr17
|
79124417
|
79127322
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308768
|
|
|
chr17
|
79124417
|
79127322
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308769
|
|
|
chr17
|
79124427
|
79127219
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308770
|
|
|
chr17
|
79124427
|
79127219
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308771
|
|
|
chr17
|
79124427
|
79127219
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308772
|
|
|
chr17
|
79124459
|
79126673
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308773
|
|
|
chr17
|
79124459
|
79126673
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108308774
|
|
|
chr17
|
79124513
|
79127080
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308775
|
|
|
chr17
|
79124513
|
79127080
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308776
|
|
|
chr17
|
79124527
|
79124540
|
TFAP2A
|
JASPAR
|
yes
|
|
21317380
|
|
|
chr17
|
79124527
|
79124540
|
TFAP2B
|
JASPAR
|
yes
|
|
21317381
|
|
|
chr17
|
79124527
|
79124540
|
TFAP2C
|
JASPAR
|
yes
|
|
21317382
|
|
|
chr17
|
79124528
|
79124540
|
TFAP2A
|
JASPAR
|
yes
|
|
21317383
|
|
|
chr17
|
79124528
|
79124540
|
TFAP2B
|
JASPAR
|
yes
|
|
21317384
|
|
|
chr17
|
79124528
|
79124540
|
TFAP2C
|
JASPAR
|
yes
|
|
21317385
|
|
|
chr17
|
79124528
|
79126068
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108308777
|
|
|
chr17
|
79124529
|
79124540
|
TFAP2A
|
JASPAR
|
yes
|
|
21317386
|
|
|
chr17
|
79124529
|
79124540
|
TFAP2B
|
JASPAR
|
yes
|
|
21317387
|
|
|
chr17
|
79124529
|
79124540
|
TFAP2C
|
JASPAR
|
yes
|
|
21317388
|
|
Genes associated with rs6565540[chr17:79124534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |