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- SNP
- rs6597[chr16:731725]
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
Transcript factors that have rs6597[chr16:731725]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
719771
|
732021
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170815
|
|
|
chr16
|
719813
|
733381
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170816
|
|
|
chr16
|
722597
|
731962
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108170817
|
|
|
chr16
|
724816
|
731785
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108170824
|
|
|
chr16
|
729499
|
731885
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108170914
|
|
Genes associated with rs6597[chr16:731725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
731671
|
734529
|
-
|
JMJD8
|
ENSG00000161999.7
|
734529
|
0
|
Breast
|
0.00159174
|
14360
|
|
|
chr16
|
731671
|
734529
|
-
|
JMJD8
|
ENSG00000161999.7
|
734529
|
0
|
Thyroid
|
7.25232e-25
|
14360
|
|
|
chr16
|
731671
|
734529
|
-
|
JMJD8
|
ENSG00000161999.7
|
734529
|
0
|
Stomach
|
0.0315093
|
14360
|
|