EnhancerDB
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  3. rs6673540[chr1:55401428]
Enhancers that have rs6673540[chr1:55401428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55397805 55407955 enh11877
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs6673540[chr1:55401428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55401420 55401428 TBX15 JASPAR yes 29007493
chr1 55401420 55401431 E2F6 JASPAR yes 29007494
chr1 55401427 55401445 RARA JASPAR yes 29007496
Genes associated with rs6673540[chr1:55401428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More