EnhancerDB
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  3. rs6690392[chr1:28837916]
Enhancers that have rs6690392[chr1:28837916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28831005 28856175 enh187
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs6690392[chr1:28837916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28837903 28837918 FOXP1 JASPAR yes 27773969
chr1 28837903 28837923 RREB1 JASPAR yes 27773970
chr1 28837903 28837924 IRF1 JASPAR yes 27773971
chr1 28837904 28837925 IRF1 JASPAR yes 27773972
chr1 28837909 28837930 IRF1 JASPAR yes 27773973
chr1 28837910 28837916 TCF4 TRANSFAC yes 27773974
chr1 28837910 28837925 FOXP1 JASPAR yes 27773975
chr1 28837910 28837931 IRF1 JASPAR yes 27773976
chr1 28837911 28837922 FOXP2 JASPAR yes 27773977
chr1 28837911 28837923 FOXC2 JASPAR yes 27773978
chr1 28837911 28837926 STAT2 JASPAR yes 27773979
chr1 28837912 28837927 FOXP1 JASPAR yes 27773980
chr1 28837914 28837929 FOXP1 JASPAR yes 27773981
chr1 28837915 28837930 FOXP1 JASPAR yes 27773982
chr1 28837916 28837931 FOXP1 JASPAR yes 27773983
Genes associated with rs6690392[chr1:28837916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More