EnhancerDB
  1. Home
  2. SNP
  3. rs6882038[chr5:172728871]
Enhancers that have rs6882038[chr5:172728871]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs6882038[chr5:172728871]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172728866 172728875 SP1 TRANSFAC yes 67865808
chr5 172728867 172728873 SP1 TRANSFAC yes 67865809
chr5 172728867 172728877 SP1 JASPAR yes 67865810
chr5 172728868 172728875 SP1 TRANSFAC yes 67865811
chr5 172728869 172728874 SP1 TRANSFAC yes 67865812
chr5 172728869 172728875 SP1 TRANSFAC yes 67865813
Genes associated with rs6882038[chr5:172728871], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More