EnhancerDB
  1. Home
  2. SNP
  3. rs689421[chr1:55398536]
Enhancers that have rs689421[chr1:55398536]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55397805 55407955 enh11877
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs689421[chr1:55398536]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55398531 55398541 POU6F2 JASPAR yes 29007028
chr1 55398532 55398542 ALX3 JASPAR yes 29007029
chr1 55398532 55398542 EMX1 JASPAR yes 29007030
chr1 55398532 55398542 EMX2 JASPAR yes 29007031
chr1 55398532 55398542 ESX1 JASPAR yes 29007032
chr1 55398532 55398542 GBX1 JASPAR yes 29007033
chr1 55398532 55398542 GSX1 JASPAR yes 29007034
chr1 55398532 55398542 GSX2 JASPAR yes 29007035
chr1 55398532 55398542 HOXB2 JASPAR yes 29007036
chr1 55398532 55398542 LBX2 JASPAR yes 29007037
chr1 55398532 55398542 LHX2 JASPAR yes 29007038
chr1 55398532 55398542 LHX6 JASPAR yes 29007039
chr1 55398532 55398542 MEOX1 JASPAR yes 29007040
chr1 55398532 55398542 MIXL1 JASPAR yes 29007041
chr1 55398532 55398542 NOTO JASPAR yes 29007042
chr1 55398532 55398542 POU6F1 JASPAR yes 29007043
chr1 55398532 55398542 RAX JASPAR yes 29007044
chr1 55398533 55398541 BSX JASPAR yes 29007045
chr1 55398533 55398541 DLX6 JASPAR yes 29007046
chr1 55398533 55398541 EN1 JASPAR yes 29007047
chr1 55398533 55398541 ISX JASPAR yes 29007048
chr1 55398533 55398541 LBX1 JASPAR yes 29007049
chr1 55398533 55398541 LHX9 JASPAR yes 29007050
chr1 55398533 55398541 LMX1A JASPAR yes 29007051
chr1 55398533 55398541 LMX1B JASPAR yes 29007052
chr1 55398533 55398541 NKX6-1 JASPAR yes 29007053
chr1 55398533 55398541 NKX6-2 JASPAR yes 29007054
chr1 55398533 55398541 PAX4 JASPAR yes 29007055
chr1 55398533 55398541 PDX1 JASPAR yes 29007056
chr1 55398533 55398541 PRRX1 JASPAR yes 29007057
chr1 55398533 55398541 RAX2 JASPAR yes 29007058
chr1 55398533 55398541 SHOX JASPAR yes 29007059
chr1 55398533 55398541 UNCX JASPAR yes 29007060
chr1 55398533 55398541 VAX1 JASPAR yes 29007061
chr1 55398533 55398541 VAX2 JASPAR yes 29007062
chr1 55398533 55398541 VSX1 JASPAR yes 29007063
chr1 55398533 55398541 VSX2 JASPAR yes 29007064
Genes associated with rs689421[chr1:55398536], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More