EnhancerDB
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  3. rs6898800[chr5:172724438]
Enhancers that have rs6898800[chr5:172724438]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs6898800[chr5:172724438]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172724426 172724439 NR2F1 JASPAR yes 67864867
chr5 172724430 172724447 PAX1 JASPAR yes 67864870
chr5 172724430 172724447 PAX9 JASPAR yes 67864871
chr5 172724434 172724439 SP1 TRANSFAC yes 67864872
chr5 172724437 172724447 SP1 JASPAR yes 67864873
Genes associated with rs6898800[chr5:172724438], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More