EnhancerDB
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  3. rs71569879[chr1:22553390]
Enhancers that have rs71569879[chr1:22553390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22552658 22568099 enh11597
Prostate (PC-3) Prostate (RWPE1) Esophagus Lung (A549) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs71569879[chr1:22553390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22553379 22553390 CDX2 JASPAR yes 27352219
chr1 22553380 22553391 HOXA10 JASPAR yes 27352220
chr1 22553381 22553390 CDX1 JASPAR yes 27352221
chr1 22553381 22553391 HOXA13 JASPAR yes 27352222
chr1 22553381 22553391 HOXB13 JASPAR yes 27352223
chr1 22553381 22553391 HOXD13 JASPAR yes 27352224
chr1 22553382 22553397 FOXP1 JASPAR yes 27352225
chr1 22553385 22553391 TBP TRANSFAC yes 27352226
chr1 22553387 22553407 RREB1 JASPAR yes 27352227
chr1 22553390 22553410 RREB1 JASPAR yes 27352228
Genes associated with rs71569879[chr1:22553390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More