EnhancerDB
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  3. rs71862109[chr6:37521723]
Enhancers that have rs71862109[chr6:37521723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37512005 37533256 enh9092
Prostate (PC-3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Thymus
chr6 37521439 37521998 vista51821
VISTA
Transcript factors that have rs71862109[chr6:37521723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540106
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540107
chr6 37521208 37524171 POLR2A UCSC Txn Factor no Conserved 108540108
chr6 37521278 37521724 RELA UCSC Txn Factor no Conserved 108540109
chr6 37521338 37521750 RUNX3 UCSC Txn Factor no Conserved 108540110
chr6 37521407 37521723 EBF1 UCSC Txn Factor no Conserved 108540111
chr6 37521717 37521738 IRF1 JASPAR yes 70358709
chr6 37521717 37521738 IRF1 JASPAR yes 101418651
chr6 37521718 37521733 FOXP1 JASPAR yes 70358710
chr6 37521718 37521733 FOXP1 JASPAR yes 101418652
chr6 37521718 37521739 IRF1 JASPAR yes 70358711
chr6 37521718 37521739 IRF1 JASPAR yes 101418653
chr6 37521719 37521740 IRF1 JASPAR yes 70358712
chr6 37521719 37521740 IRF1 JASPAR yes 101418654
chr6 37521720 37521741 IRF1 JASPAR yes 70358713
chr6 37521720 37521741 IRF1 JASPAR yes 101418655
chr6 37521721 37521725 YY1 TRANSFAC yes 70358714
chr6 37521721 37521725 YY1 TRANSFAC yes 101418656
chr6 37521722 37521737 FOXP1 JASPAR yes 70358715
chr6 37521722 37521737 FOXP1 JASPAR yes 101418657
chr6 37521723 37521738 FOXP1 JASPAR yes 70358716
chr6 37521723 37521738 FOXP1 JASPAR yes 101418658
Genes associated with rs71862109[chr6:37521723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More