EnhancerDB
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  3. rs72641829[chr1:9335054]
Enhancers that have rs72641829[chr1:9335054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9333529 9345537 enh26524
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus
Transcript factors that have rs72641829[chr1:9335054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9335042 9335057 SCRT1 JASPAR yes 26633817
chr1 9335045 9335057 PKNOX1 JASPAR yes 26633819
chr1 9335045 9335057 PKNOX2 JASPAR yes 26633820
chr1 9335045 9335057 TGIF1 JASPAR yes 26633821
chr1 9335045 9335057 TGIF2 JASPAR yes 26633822
chr1 9335046 9335055 SNAI2 JASPAR yes 26633823
chr1 9335046 9335056 FIGLA JASPAR yes 26633824
chr1 9335046 9335056 ID4 JASPAR yes 26633825
chr1 9335046 9335056 MSC JASPAR yes 26633826
chr1 9335046 9335056 MYF6 JASPAR yes 26633827
chr1 9335046 9335056 TCF3 JASPAR yes 26633828
chr1 9335046 9335056 TCF4 JASPAR yes 26633829
chr1 9335048 9335057 ZEB1 JASPAR yes 26633830
chr1 9335048 9335058 TBX21 JASPAR yes 26633831
chr1 9335049 9335057 MGA JASPAR yes 26633832
chr1 9335049 9335057 TBX15 JASPAR yes 26633833
chr1 9335049 9335057 TBX1 JASPAR yes 26633834
chr1 9335049 9335057 TBX4 JASPAR yes 26633835
chr1 9335049 9335057 TBX5 JASPAR yes 26633836
chr1 9335049 9335059 TBR1 JASPAR yes 26633837
chr1 9335049 9335062 SMAD2 JASPAR yes 26633838
Genes associated with rs72641829[chr1:9335054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More