EnhancerDB
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  3. rs72828973[chr17:55292948]
Enhancers that have rs72828973[chr17:55292948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55285385 55295002 enh32241
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Epithelial (MCF-7)
chr17 55292764 55293032 vista25223
VISTA
Transcript factors that have rs72828973[chr17:55292948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55279640 55310940 ZNF274 GTRD no Liver (HepG2) 108273608
chr17 55279640 55310940 ZNF274 GTRD no Liver (HepG2) 108273609
chr17 55291399 55296852 ZNF274 GTRD no Liver (HepG2) 108273623
chr17 55292554 55293268 POLR2A UCSC Txn Factor no Conserved 108273625
chr17 55292607 55293103 GATA3 UCSC Txn Factor no Conserved 108273626
chr17 55292613 55293183 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21773292
chr17 55292613 55293183 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108273627
chr17 55292617 55293087 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21773293
chr17 55292617 55293087 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108273628
chr17 55292648 55293048 FOS UCSC Txn Factor no Conserved 108273629
chr17 55292650 55293060 GATA2 UCSC Txn Factor no Conserved 108273630
chr17 55292681 55293041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773294
chr17 55292681 55293041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273631
chr17 55292681 55293053 MYC UCSC Txn Factor no Conserved 108273632
chr17 55292684 55293024 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773296
chr17 55292684 55293024 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273634
chr17 55292685 55292995 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21773297
chr17 55292685 55292995 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108273635
chr17 55292693 55293003 NR3C1 UCSC Txn Factor no Conserved 108273636
chr17 55292696 55293016 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773298
chr17 55292696 55293016 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273637
chr17 55292714 55293090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773299
chr17 55292714 55293090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273638
chr17 55292718 55292998 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108273639
chr17 55292830 55293186 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21773300
chr17 55292830 55293186 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273640
chr17 55292934 55292949 MEF2A JASPAR yes 21259181
chr17 55292934 55292949 MEF2A JASPAR yes 54935675
chr17 55292935 55292950 MEF2C JASPAR yes 21259182
chr17 55292935 55292950 MEF2C JASPAR yes 54935676
chr17 55292940 55292955 HSF1 JASPAR yes 21259184
chr17 55292940 55292955 HSF1 JASPAR yes 54935678
chr17 55292941 55292954 HSF1 JASPAR yes 21259185
chr17 55292941 55292954 HSF2 JASPAR yes 21259186
chr17 55292941 55292954 HSF1 JASPAR yes 54935679
chr17 55292941 55292954 HSF2 JASPAR yes 54935680
chr17 55292944 55292954 REL JASPAR yes 21259187
chr17 55292944 55292954 REL JASPAR yes 54935681
chr17 55292944 55292955 NFKB1 JASPAR yes 21259188
chr17 55292944 55292955 NFKB1 JASPAR yes 54935682
chr17 55292945 55292955 NFKB1 JASPAR yes 21259189
chr17 55292945 55292955 RELA JASPAR yes 21259190
chr17 55292945 55292955 REL JASPAR yes 21259191
chr17 55292945 55292955 NFKB1 JASPAR yes 54935683
chr17 55292945 55292955 RELA JASPAR yes 54935684
chr17 55292945 55292955 REL JASPAR yes 54935685
chr17 55292945 55292956 NFKB1 JASPAR yes 21259192
chr17 55292945 55292956 NFKB1 JASPAR yes 54935686
chr17 55292948 55292958 NFATC3 JASPAR yes 21259193
chr17 55292948 55292958 NFATC3 JASPAR yes 54935687
Genes associated with rs72828973[chr17:55292948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 55333212 55762046 + MSI2 ENSG00000153944.6 55333212 40264 Ovary 0.242618 16072