EnhancerDB
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  3. rs72839046[chr17:57585780]
Enhancers that have rs72839046[chr17:57585780]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57580365 57586755 enh17261
Placenta Lung (PC-9)
chr17 57585734 57585943 vista25337
VISTA
Transcript factors that have rs72839046[chr17:57585780]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57582888 57586276 ZNF143 GTRD no Epithelial (MCF-7) 108276288
chr17 57585158 57588780 ZNF143 GTRD no Epithelial (MCF-7) 108276289
chr17 57585316 57586849 ZBTB33 GTRD no Brain (SK-N-SH) 108276290
chr17 57585405 57586184 ZNF143 GTRD no Epithelial (MCF-7) 108276291
chr17 57585555 57586145 ZNF143 GTRD no Epithelial (MCF-7) 108276292
chr17 57585566 57586094 TCF7L2 GTRD no Colon (HCT116) 108276293
chr17 57585569 57585973 TCF7L2 GTRD no Colon (HCT116) 108276294
chr17 57585603 57586074 ZNF143 GTRD no Epithelial (MCF-7) 108276295
chr17 57585605 57586028 TCF7L2 GTRD no Colon (HCT116) 108276296
chr17 57585773 57585785 HLF JASPAR yes 21264661
chr17 57585773 57585785 TEF JASPAR yes 21264662
chr17 57585773 57585785 HLF JASPAR yes 55067182
chr17 57585773 57585785 TEF JASPAR yes 55067183
chr17 57585775 57585783 GMEB2 JASPAR yes 21264663
chr17 57585775 57585783 GMEB2 JASPAR yes 55067184
chr17 57585777 57585797 PPARG JASPAR yes 21264664
chr17 57585777 57585797 PPARG JASPAR yes 55067185
Genes associated with rs72839046[chr17:57585780], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 57970447 58027925 + RPS6KB1 ENSG00000108443.9 57970447 384667 Ovary 0.587214 16108