EnhancerDB
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  3. rs73111421[chr12:53060235]
Enhancers that have rs73111421[chr12:53060235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53058385 53062590 enh51212
Large Intestine
Transcript factors that have rs73111421[chr12:53060235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53057557 53064617 ZNF143 GTRD no Epithelial (MCF-7) 21547269
chr12 53057804 53063378 ZNF143 GTRD no Epithelial (MCF-7) 21547270
chr12 53059450 53063290 ZNF143 GTRD no Epithelial (MCF-7) 21547271
chr12 53059455 53064326 ZNF143 GTRD no Epithelial (MCF-7) 21547272
chr12 53059468 53062948 ZNF143 GTRD no Epithelial (MCF-7) 21547273
chr12 53059474 53064324 ZNF143 GTRD no Epithelial (MCF-7) 21547274
chr12 53060219 53060240 ZNF263 JASPAR yes 120949293
chr12 53060221 53060236 FOXP1 JASPAR yes 120949295
chr12 53060221 53060242 IRF1 JASPAR yes 120949296
chr12 53060222 53060243 IRF1 JASPAR yes 120949297
chr12 53060222 53060243 ZNF263 JASPAR yes 120949298
chr12 53060226 53060241 STAT2 JASPAR yes 120949300
chr12 53060227 53060242 FOXP1 JASPAR yes 120949301
chr12 53060228 53060249 IRF1 JASPAR yes 120949302
chr12 53060230 53060245 IRF9 JASPAR yes 120949303
chr12 53060232 53060246 SPIC JASPAR yes 120949304
chr12 53060232 53060246 STAT1 JASPAR yes 120949305
chr12 53060232 53060247 PRDM1 JASPAR yes 120949306
Genes associated with rs73111421[chr12:53060235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 53604354 53626764 - RARG ENSG00000172819.12 53626764 544119 Thyroid 0.0470726 12115