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- rs746423[chr12:54417259]
Enhancers that have rs746423[chr12:54417259]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
54405914 |
54417704 |
enh86112 |
|
|
Transcript factors that have rs746423[chr12:54417259]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
54416396
|
54430153
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107686659
|
|
|
chr12
|
54416396
|
54430153
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108036936
|
|
|
chr12
|
54416396
|
54430153
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108036937
|
|
|
chr12
|
54416472
|
54422706
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108036938
|
|
|
chr12
|
54416596
|
54418629
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036939
|
|
|
chr12
|
54416622
|
54418630
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108036940
|
|
|
chr12
|
54416657
|
54420260
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036941
|
|
|
chr12
|
54416697
|
54417639
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036942
|
|
|
chr12
|
54416702
|
54417393
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036943
|
|
|
chr12
|
54416703
|
54418575
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036944
|
|
|
chr12
|
54416723
|
54418799
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036945
|
|
|
chr12
|
54416749
|
54418194
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036946
|
|
|
chr12
|
54416763
|
54418410
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108036948
|
|
|
chr12
|
54416780
|
54421864
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036949
|
|
|
chr12
|
54416801
|
54418611
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036950
|
|
|
chr12
|
54416833
|
54417989
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
21550231
|
|
|
chr12
|
54416833
|
54417989
|
TEF1
|
GTRD
|
no
|
Bone (Osteoblast)
|
108036951
|
|
|
chr12
|
54416842
|
54418037
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036952
|
|
|
chr12
|
54416950
|
54417722
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108036953
|
|
|
chr12
|
54416973
|
54418575
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108036954
|
|
|
chr12
|
54417244
|
54417259
|
LEF1
|
JASPAR
|
yes
|
|
121019659
|
|
|
chr12
|
54417256
|
54417266
|
BARHL2
|
JASPAR
|
yes
|
|
121019660
|
|
Genes associated with rs746423[chr12:54417259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr12
|
54402832
|
54407570
|
+
|
HOXC8
|
ENSG00000037965.4
|
54402832
|
9689
|
Esophagus
|
2.49388e-05
|
12140
|
|
|
chr12
|
54402832
|
54407570
|
+
|
HOXC8
|
ENSG00000037965.4
|
54402832
|
9689
|
Esophagus
|
5.37487e-05
|
12140
|
|
|
chr12
|
54384408
|
54424607
|
+
|
HOXC6
|
ENSG00000197757.7
|
54384408
|
0
|
Heart
|
0.151993
|
12138
|
|
|
chr12
|
54402832
|
54407570
|
+
|
HOXC8
|
ENSG00000037965.4
|
54402832
|
9689
|
Lung
|
0.000157529
|
12140
|
|