EnhancerDB
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  3. rs74908854[chr5:172729463]
Enhancers that have rs74908854[chr5:172729463]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs74908854[chr5:172729463]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172729332 172730116 TCF7L2 UCSC Txn Factor no Conserved 108537554
chr5 172729460 172729470 NFIA JASPAR yes 67865913
chr5 172729460 172730075 TFAP2C UCSC Txn Factor no Conserved 108537555
chr5 172729462 172729468 NFIC JASPAR yes 67865914
Genes associated with rs74908854[chr5:172729463], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More