EnhancerDB
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  3. rs75405427[chr1:45870220]
Enhancers that have rs75405427[chr1:45870220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45865505 45871175 enh11824
Brain (SK-N-MC) Large Intestine Esophagus Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs75405427[chr1:45870220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45870209 45870220 PHOX2A JASPAR yes 28601946
chr1 45870209 45870220 PROP1 JASPAR yes 28601947
chr1 45870209 45870225 POU4F2 JASPAR yes 28601948
chr1 45870209 45870225 POU4F3 JASPAR yes 28601949
chr1 45870211 45870222 HOXA10 JASPAR yes 28601951
chr1 45870211 45870226 HNF1A JASPAR yes 28601952
chr1 45870212 45870222 GSX2 JASPAR yes 28601953
chr1 45870212 45870222 HOXB2 JASPAR yes 28601954
chr1 45870212 45870222 HOXB3 JASPAR yes 28601955
chr1 45870212 45870222 MNX1 JASPAR yes 28601956
chr1 45870212 45870222 POU6F1 JASPAR yes 28601957
chr1 45870213 45870221 LMX1A JASPAR yes 28601958
chr1 45870213 45870221 LMX1B JASPAR yes 28601959
chr1 45870213 45870221 NKX6-1 JASPAR yes 28601960
chr1 45870213 45870221 NKX6-2 JASPAR yes 28601961
chr1 45870213 45870221 VAX1 JASPAR yes 28601962
chr1 45870213 45870221 VAX2 JASPAR yes 28601963
chr1 45870213 45870221 VSX1 JASPAR yes 28601964
chr1 45870213 45870221 VSX2 JASPAR yes 28601965
chr1 45870216 45870228 FOXC2 JASPAR yes 28601966
chr1 45870218 45870222 YY1 TRANSFAC yes 28601967
chr1 45870219 45870234 FOXP1 JASPAR yes 28601968
chr1 45870220 45870235 FOXP1 JASPAR yes 28601969
Genes associated with rs75405427[chr1:45870220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More