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- rs7542405[chr1:20949589]
Enhancers that have rs7542405[chr1:20949589]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
20946745 |
20950895 |
enh11587 |
|
|
Transcript factors that have rs7542405[chr1:20949589]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
20949571
|
20949592
|
IRF1
|
JASPAR
|
yes
|
|
27256697
|
|
|
chr1
|
20949573
|
20949594
|
IRF1
|
JASPAR
|
yes
|
|
27256698
|
|
|
chr1
|
20949577
|
20949598
|
IRF1
|
JASPAR
|
yes
|
|
27256699
|
|
|
chr1
|
20949579
|
20949594
|
IRF9
|
JASPAR
|
yes
|
|
27256700
|
|
|
chr1
|
20949580
|
20949594
|
IRF7
|
JASPAR
|
yes
|
|
27256701
|
|
|
chr1
|
20949581
|
20949596
|
PRDM1
|
JASPAR
|
yes
|
|
27256702
|
|
|
chr1
|
20949581
|
20949596
|
STAT2
|
JASPAR
|
yes
|
|
27256703
|
|
|
chr1
|
20949583
|
20949598
|
FOXP1
|
JASPAR
|
yes
|
|
27256704
|
|
|
chr1
|
20949584
|
20949595
|
FOXA1
|
JASPAR
|
yes
|
|
27256705
|
|
|
chr1
|
20949585
|
20949597
|
FOXC2
|
JASPAR
|
yes
|
|
27256706
|
|
|
chr1
|
20949586
|
20949597
|
FOXP2
|
JASPAR
|
yes
|
|
27256707
|
|
|
chr1
|
20949588
|
20949597
|
SRY
|
JASPAR
|
yes
|
|
27256708
|
|
Genes associated with rs7542405[chr1:20949589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
20915441
|
20945401
|
+
|
CDA
|
ENSG00000158825.5
|
20915441
|
4188
|
Esophagus
|
0.000592621
|
281
|
|
|
chr1
|
20915441
|
20945401
|
+
|
CDA
|
ENSG00000158825.5
|
20915441
|
4188
|
Heart
|
2.14954e-11
|
281
|
|
|
chr1
|
20915441
|
20945401
|
+
|
CDA
|
ENSG00000158825.5
|
20915441
|
4188
|
Pancreas
|
0.107974
|
281
|
|
|
chr1
|
20915441
|
20945401
|
+
|
CDA
|
ENSG00000158825.5
|
20915441
|
4188
|
Breast
|
6.25578e-10
|
281
|
|
|
chr1
|
20915441
|
20945401
|
+
|
CDA
|
ENSG00000158825.5
|
20915441
|
4188
|
Ovary
|
0.265379
|
281
|
|