EnhancerDB
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  3. rs7544116[chr1:109767740]
Enhancers that have rs7544116[chr1:109767740]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109766765 109770935 enh12124
Astrocyte Placenta Cervix (HeLa-S3) Lung (PC-9)
Transcript factors that have rs7544116[chr1:109767740]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109767728 109767742 FOXF2 JASPAR yes 31417594
chr1 109767728 109767742 ONECUT3 JASPAR yes 31417595
chr1 109767728 109767743 FOXP1 JASPAR yes 31417596
chr1 109767729 109767740 FOXA1 JASPAR yes 31417597
chr1 109767729 109767744 FOXA1 JASPAR yes 31417598
chr1 109767730 109767741 FOXB1 JASPAR yes 31417599
chr1 109767730 109767741 FOXC1 JASPAR yes 31417600
chr1 109767730 109767742 FOXC2 JASPAR yes 31417601
chr1 109767731 109767743 FOXI1 JASPAR yes 31417602
chr1 109767733 109767747 POU4F1 JASPAR yes 31417603
chr1 109767734 109767745 PHOX2A JASPAR yes 31417604
chr1 109767734 109767745 PROP1 JASPAR yes 31417605
chr1 109767736 109767750 POU4F1 JASPAR yes 31417606
chr1 109767737 109767750 DUXA JASPAR yes 31417607
chr1 109767738 109767749 DUX4 JASPAR yes 31417608
chr1 109767738 109767749 PHOX2A JASPAR yes 31417609
chr1 109767738 109767749 PROP1 JASPAR yes 31417610
chr1 109767738 109767754 POU4F2 JASPAR yes 31417611
chr1 109767738 109767754 POU4F3 JASPAR yes 31417612
chr1 109767739 109767749 PAX3 JASPAR yes 31417613
chr1 109767739 109767749 PAX7 JASPAR yes 31417614
chr1 109767740 109767754 POU4F1 JASPAR yes 31417615
chr1 109767740 109767755 HNF1A JASPAR yes 31417616
Genes associated with rs7544116[chr1:109767740], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More