EnhancerDB
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  3. rs759064427[chr12:54218329]
Enhancers that have rs759064427[chr12:54218329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54212382 54224675 enh43743
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs759064427[chr12:54218329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54214081 54218599 ZNF274 GTRD no Cervix (HeLa-S3) 21549861
chr12 54215835 54218451 ZNF143 GTRD no Epithelial (MCF-7) 21549925
chr12 54216202 54218750 ZNF143 GTRD no Epithelial (MCF-7) 21549927
chr12 54217468 54218395 ZNF143 GTRD no Epithelial (MCF-7) 21549968
chr12 54217506 54218359 ZNF143 GTRD no Epithelial (MCF-7) 21549969
chr12 54218115 54218435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549972
chr12 54218162 54218438 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549973
chr12 54218184 54218424 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21549974
chr12 54218321 54218342 IRF1 JASPAR yes 121011328
chr12 54218323 54218344 IRF1 JASPAR yes 121011329
chr12 54218326 54218341 FOXP1 JASPAR yes 121011330
chr12 54218328 54218343 FOXP1 JASPAR yes 121011331
chr12 54218329 54218344 FOXP1 JASPAR yes 121011332
Genes associated with rs759064427[chr12:54218329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More