-
Home
- SNP
- rs76456798[chr19:10519554]
Enhancers that have rs76456798[chr19:10519554]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
10515565 |
10521735 |
enh48167 |
|
|
Transcript factors that have rs76456798[chr19:10519554]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
10518241
|
10519710
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108383291
|
|
|
chr19
|
10518577
|
10519588
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108383292
|
|
|
chr19
|
10519298
|
10519982
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383293
|
|
|
chr19
|
10519302
|
10519894
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108383294
|
|
|
chr19
|
10519403
|
10519923
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383295
|
|
|
chr19
|
10519411
|
10519931
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383296
|
|
|
chr19
|
10519430
|
10519866
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383297
|
|
|
chr19
|
10519431
|
10519751
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383298
|
|
|
chr19
|
10519471
|
10519801
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383299
|
|
|
chr19
|
10519513
|
10519793
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383300
|
|
|
chr19
|
10519513
|
10519833
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383301
|
|
|
chr19
|
10519514
|
10519775
|
SPI1
|
UCSC Txn Factor
|
no
|
Conserved
|
108383302
|
|
|
chr19
|
10519514
|
10519775
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383303
|
|
|
chr19
|
10519514
|
10519778
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383304
|
|
|
chr19
|
10519515
|
10519925
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383305
|
|
|
chr19
|
10519519
|
10519829
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383306
|
|
|
chr19
|
10519520
|
10519876
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383307
|
|
|
chr19
|
10519527
|
10519796
|
RUNX3
|
UCSC Txn Factor
|
no
|
Conserved
|
108383308
|
|
|
chr19
|
10519527
|
10519796
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383309
|
|
|
chr19
|
10519541
|
10519831
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108383310
|
|
|
chr19
|
10519549
|
10519555
|
ETS1
|
JASPAR
|
yes
|
|
112420242
|
|
|
chr19
|
10519549
|
10519555
|
SPI1
|
JASPAR
|
yes
|
|
112420243
|
|
Genes associated with rs76456798[chr19:10519554], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |