EnhancerDB
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  3. rs77628241[chr12:55238800]
Enhancers that have rs77628241[chr12:55238800]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 55238785 55242935 enh111919
Brain (SK-N-MC)
Transcript factors that have rs77628241[chr12:55238800]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 55238790 55238800 ALX3 JASPAR yes 121057087
chr12 55238790 55238800 EMX2 JASPAR yes 121057088
chr12 55238790 55238800 ESX1 JASPAR yes 121057089
chr12 55238790 55238800 GBX2 JASPAR yes 121057090
chr12 55238790 55238800 GSX1 JASPAR yes 121057091
chr12 55238790 55238800 GSX2 JASPAR yes 121057092
chr12 55238790 55238800 HESX1 JASPAR yes 121057093
chr12 55238790 55238800 HOXB2 JASPAR yes 121057094
chr12 55238790 55238800 HOXB3 JASPAR yes 121057095
chr12 55238790 55238800 LBX2 JASPAR yes 121057096
chr12 55238790 55238800 LHX2 JASPAR yes 121057097
chr12 55238790 55238800 LHX6 JASPAR yes 121057098
chr12 55238790 55238800 MEOX1 JASPAR yes 121057099
chr12 55238790 55238800 MEOX2 JASPAR yes 121057100
chr12 55238790 55238800 MIXL1 JASPAR yes 121057101
chr12 55238790 55238800 MNX1 JASPAR yes 121057102
chr12 55238790 55238800 NOTO JASPAR yes 121057103
chr12 55238790 55238800 POU6F1 JASPAR yes 121057104
chr12 55238790 55238800 RAX JASPAR yes 121057105
chr12 55238791 55238801 HOXD13 JASPAR yes 121057126
Genes associated with rs77628241[chr12:55238800], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More