EnhancerDB
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  3. rs778002288[chr4:90212981]
Enhancers that have rs778002288[chr4:90212981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 90201865 90227715 enh8088
Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Pancreas Thymus Heart
chr4 90212945 90213002 vista45387
VISTA
Transcript factors that have rs778002288[chr4:90212981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 90212975 90212996 IRF1 JASPAR yes 49258405
chr4 90212975 90212996 IRF1 JASPAR yes 91225117
chr4 90212978 90212999 IRF1 JASPAR yes 49258406
chr4 90212978 90212999 IRF1 JASPAR yes 91225118
chr4 90212979 90213000 IRF1 JASPAR yes 49258407
chr4 90212979 90213000 IRF1 JASPAR yes 91225119
chr4 90212980 90212995 FOXP1 JASPAR yes 49258408
chr4 90212980 90212995 FOXP1 JASPAR yes 91225120
chr4 90212980 90213001 IRF1 JASPAR yes 49258409
chr4 90212980 90213001 IRF1 JASPAR yes 91225121
chr4 90212981 90212996 FOXP1 JASPAR yes 49258410
chr4 90212981 90212996 FOXP1 JASPAR yes 91225122
chr4 90212981 90213002 IRF1 JASPAR yes 49258411
chr4 90212981 90213002 IRF1 JASPAR yes 91225123
Genes associated with rs778002288[chr4:90212981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More