EnhancerDB
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  3. rs78001030[chr1:12059548]
Enhancers that have rs78001030[chr1:12059548]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12056765 12060915 enh11503
Placenta
Transcript factors that have rs78001030[chr1:12059548]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12059534 12059549 FOXA1 JASPAR yes 26794215
chr1 12059536 12059548 FOXC2 JASPAR yes 26794216
chr1 12059537 12059548 FOXB1 JASPAR yes 26794217
chr1 12059537 12059548 FOXC1 JASPAR yes 26794218
chr1 12059537 12059553 POU4F2 JASPAR yes 26794219
chr1 12059537 12059553 POU4F3 JASPAR yes 26794220
chr1 12059538 12059549 FOXA1 JASPAR yes 26794222
chr1 12059539 12059554 HNF1A JASPAR yes 26794223
chr1 12059541 12059548 NKX3-1 JASPAR yes 26794224
chr1 12059541 12059557 POU4F2 JASPAR yes 26794225
chr1 12059542 12059557 FOXA1 JASPAR yes 26794226
chr1 12059543 12059555 FOXI1 JASPAR yes 26794227
chr1 12059543 12059557 POU4F1 JASPAR yes 26794228
chr1 12059544 12059556 FOXC2 JASPAR yes 26794229
chr1 12059545 12059556 FOXB1 JASPAR yes 26794230
chr1 12059545 12059556 FOXC1 JASPAR yes 26794231
chr1 12059545 12059556 PROP1 JASPAR yes 26794232
chr1 12059546 12059550 YY1 TRANSFAC yes 26794233
chr1 12059546 12059561 MEF2A JASPAR yes 26794234
chr1 12059547 12059562 MEF2C JASPAR yes 26794235
chr1 12059548 12059560 MEF2A JASPAR yes 26794236
chr1 12059548 12059560 MEF2D JASPAR yes 26794237
Genes associated with rs78001030[chr1:12059548], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More