-
Home
- SNP
- rs78001336[chr16:27418412]
Enhancers that have rs78001336[chr16:27418412]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
27411465 |
27422375 |
enh31753 |
|
|
| chr16 |
27417796 |
27418436 |
vista22279 |
|
|
Transcript factors that have rs78001336[chr16:27418412]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
27416637
|
27419003
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108190714
|
|
|
chr16
|
27416637
|
27419003
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108190715
|
|
|
chr16
|
27417997
|
27418497
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108190769
|
|
|
chr16
|
27418250
|
27418679
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108190770
|
|
|
chr16
|
27418396
|
27418417
|
ZNF263
|
JASPAR
|
yes
|
|
10192934
|
|
|
chr16
|
27418396
|
27418417
|
ZNF263
|
JASPAR
|
yes
|
|
49361432
|
|
|
chr16
|
27418403
|
27418413
|
EVX2
|
JASPAR
|
yes
|
|
10192935
|
|
|
chr16
|
27418403
|
27418413
|
GSX1
|
JASPAR
|
yes
|
|
10192936
|
|
|
chr16
|
27418403
|
27418413
|
HOXA2
|
JASPAR
|
yes
|
|
10192937
|
|
|
chr16
|
27418403
|
27418413
|
NOTO
|
JASPAR
|
yes
|
|
10192938
|
|
|
chr16
|
27418403
|
27418413
|
EVX2
|
JASPAR
|
yes
|
|
49361433
|
|
|
chr16
|
27418403
|
27418413
|
GSX1
|
JASPAR
|
yes
|
|
49361434
|
|
|
chr16
|
27418403
|
27418413
|
HOXA2
|
JASPAR
|
yes
|
|
49361435
|
|
|
chr16
|
27418403
|
27418413
|
NOTO
|
JASPAR
|
yes
|
|
49361436
|
|
Genes associated with rs78001336[chr16:27418412], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |