EnhancerDB
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Enhancers that have rs78143038[chr1:172640031]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172637585 172654275 enh50047
Blood (T-cell) Large Intestine
chr1 172639921 172640161 vista3899
VISTA
Transcript factors that have rs78143038[chr1:172640031]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172636359 172641403 ZNF274 GTRD no Bone Marrow (K562) 107845930
chr1 172638469 172640081 ZBTB33 GTRD no Brain (SK-N-SH) 107845932
chr1 172638540 172640301 ZBTB33 GTRD no Brain (SK-N-SH) 107845933
chr1 172638543 172640158 P63 GTRD no Skin (Keratinocyte) 107845934
chr1 172638569 172640123 P63 GTRD no Skin (Keratinocyte) 107845936
chr1 172638590 172640034 P63 GTRD no Skin (Keratinocyte) 107845938
chr1 172638712 172640088 ZNF143 GTRD no Epithelial (MCF-7) 107845943
chr1 172638808 172640443 ZNF143 GTRD no Epithelial (MCF-7) 107845945
chr1 172639105 172640105 ZNF143 GTRD no Epithelial (MCF-7) 107845947
chr1 172639204 172640602 ZNF143 GTRD no Epithelial (MCF-7) 107845952
chr1 172639212 172640726 ZNF143 GTRD no Epithelial (MCF-7) 107845953
chr1 172639238 172640222 ZNF143 GTRD no Epithelial (MCF-7) 107845954
chr1 172639290 172640127 ZNF143 GTRD no Epithelial (MCF-7) 107845956
chr1 172639326 172640599 ZNF143 GTRD no Epithelial (MCF-7) 107845957
chr1 172639346 172640039 ZNF143 GTRD no Epithelial (MCF-7) 107845959
chr1 172639350 172640090 ZNF143 GTRD no Epithelial (MCF-7) 107845960
chr1 172639396 172640085 ZNF143 GTRD no Epithelial (MCF-7) 107845963
chr1 172640025 172640046 ZNF263 JASPAR yes 33144020
chr1 172640025 172640046 ZNF263 JASPAR yes 118399417
Genes associated with rs78143038[chr1:172640031], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More