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- rs78199000[chr1:42306687]
Enhancers that have rs78199000[chr1:42306687]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
42304419 |
42311275 |
enh26654 |
|
|
Transcript factors that have rs78199000[chr1:42306687]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
42306685
|
42306696
|
CDX2
|
JASPAR
|
yes
|
|
28428384
|
|
|
chr1
|
42306686
|
42306696
|
MNX1
|
JASPAR
|
yes
|
|
28428385
|
|
|
chr1
|
42306686
|
42306697
|
HOXA10
|
JASPAR
|
yes
|
|
28428386
|
|
|
chr1
|
42306686
|
42306697
|
HOXC12
|
JASPAR
|
yes
|
|
28428387
|
|
|
chr1
|
42306687
|
42306696
|
CDX1
|
JASPAR
|
yes
|
|
28428388
|
|
|
chr1
|
42306687
|
42306697
|
HOXA13
|
JASPAR
|
yes
|
|
28428389
|
|
|
chr1
|
42306687
|
42306697
|
HOXB13
|
JASPAR
|
yes
|
|
28428390
|
|
|
chr1
|
42306687
|
42306697
|
HOXC10
|
JASPAR
|
yes
|
|
28428391
|
|
|
chr1
|
42306687
|
42306697
|
HOXD13
|
JASPAR
|
yes
|
|
28428392
|
|
Genes associated with rs78199000[chr1:42306687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
41326729
|
41328018
|
-
|
CITED4
|
ENSG00000179862.5
|
41328018
|
978669
|
Esophagus
|
0.0828999
|
571
|
|