EnhancerDB
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  3. rs78227288[chr3:10409897]
Enhancers that have rs78227288[chr3:10409897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 10404579 10410848 enh20319
Prostate (PC-3) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast)
Transcript factors that have rs78227288[chr3:10409897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 10409895 10409905 ALX3 JASPAR yes 369673
chr3 10409895 10409905 EN2 JASPAR yes 369674
chr3 10409895 10409905 ESX1 JASPAR yes 369675
chr3 10409895 10409905 GBX1 JASPAR yes 369676
chr3 10409895 10409905 GBX2 JASPAR yes 369677
chr3 10409895 10409905 GSX1 JASPAR yes 369678
chr3 10409895 10409905 HESX1 JASPAR yes 369679
chr3 10409895 10409905 HOXA2 JASPAR yes 369680
chr3 10409895 10409905 LBX2 JASPAR yes 369681
chr3 10409895 10409905 LHX2 JASPAR yes 369682
chr3 10409895 10409905 MIXL1 JASPAR yes 369683
chr3 10409895 10409905 RAX JASPAR yes 369684
chr3 10409896 10409904 BARX1 JASPAR yes 369685
chr3 10409896 10409904 BSX JASPAR yes 369686
chr3 10409896 10409904 EN1 JASPAR yes 369687
chr3 10409896 10409904 ISX JASPAR yes 369688
chr3 10409896 10409904 LHX9 JASPAR yes 369689
chr3 10409896 10409904 MSX1 JASPAR yes 369690
chr3 10409896 10409904 MSX2 JASPAR yes 369691
chr3 10409896 10409904 PRRX1 JASPAR yes 369692
chr3 10409896 10409904 RAX2 JASPAR yes 369693
chr3 10409896 10409904 SHOX JASPAR yes 369694
chr3 10409896 10409910 GLIS3 JASPAR yes 369695
Genes associated with rs78227288[chr3:10409897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More