EnhancerDB
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  3. rs78308977[chr13:113370078]
Enhancers that have rs78308977[chr13:113370078]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs78308977[chr13:113370078]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113370072 113370085 EOMES JASPAR yes 60429162
chr13 113370072 113370088 E2F2 JASPAR yes 60429163
chr13 113370074 113370084 TBR1 JASPAR yes 60429164
chr13 113370075 113370085 TBX21 JASPAR yes 60429165
chr13 113370076 113370084 TBX15 JASPAR yes 60429166
chr13 113370076 113370084 TBX4 JASPAR yes 60429167
chr13 113370076 113370085 ZEB1 JASPAR yes 60429168
chr13 113370076 113370091 SCRT1 JASPAR yes 60429169
chr13 113370077 113370087 ID4 JASPAR yes 60429170
chr13 113370077 113370087 NHLH1 JASPAR yes 60429171
chr13 113370077 113370087 TCF3 JASPAR yes 60429172
chr13 113370077 113370087 TCF4 JASPAR yes 60429173
chr13 113370078 113370087 SNAI2 JASPAR yes 60429174
chr13 113370078 113370091 SCRT2 JASPAR yes 60429175
Genes associated with rs78308977[chr13:113370078], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More