EnhancerDB
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  3. rs78425706[chr19:10317456]
Enhancers that have rs78425706[chr19:10317456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10312418 10322247 enh17912
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs78425706[chr19:10317456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10315370 10318482 TCF7L2 GTRD no Colon (HCT116) 21848349
chr19 10315370 10318482 TCF7L2 GTRD no Colon (HCT116) 108382926
chr19 10317035 10317539 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21848355
chr19 10317035 10317539 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108382943
chr19 10317233 10317890 TCF7L2 GTRD no Colon (HCT116) 21848358
chr19 10317233 10317890 TCF7L2 GTRD no Colon (HCT116) 108382946
chr19 10317440 10317460 ESR1 JASPAR yes 112412389
chr19 10317443 10317461 ESR1 JASPAR yes 112412391
chr19 10317443 10317461 ESR2 JASPAR yes 112412392
chr19 10317444 10317461 ESR1 JASPAR yes 112412393
chr19 10317444 10317462 ESR1 JASPAR yes 112412394
chr19 10317445 10317460 ESR2 JASPAR yes 112412395
chr19 10317445 10317465 ESR1 JASPAR yes 112412396
Genes associated with rs78425706[chr19:10317456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More