EnhancerDB
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  3. rs78438401[chr12:57546022]
Enhancers that have rs78438401[chr12:57546022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
Transcript factors that have rs78438401[chr12:57546022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 57545421 57548153 ZNF274 GTRD no Bone Marrow (K562) 108039841
chr12 57545431 57547640 ZNF143 GTRD no Epithelial (MCF-7) 108039842
chr12 57545464 57546800 TCF7L2 GTRD no Colon (HCT116) 108039843
chr12 57545485 57546853 TCF7L2 GTRD no Colon (HCT116) 108039844
chr12 57545581 57555416 ZNF274 GTRD no Bone Marrow (K562) 108039845
chr12 57545614 57548119 ZNF143 GTRD no Epithelial (MCF-7) 108039846
chr12 57545621 57547865 ZNF274 GTRD no Bone Marrow (K562) 108039847
chr12 57545623 57547960 ZBTB33 GTRD no Lung (A549) 108039848
chr12 57545634 57546742 ZNF274 GTRD no Bone Marrow (K562) 108039849
chr12 57545638 57547714 ZNF274 GTRD no Cervix (HeLa-S3) 108039850
chr12 57545651 57547619 ZNF274 GTRD no Bone Marrow (K562) 108039851
chr12 57545652 57547723 ZNF274 GTRD no Liver (HepG2) 108039852
chr12 57545668 57547439 ZNF274 GTRD no Bone Marrow (K562) 108039853
chr12 57545681 57547714 ZNF274 GTRD no Blood (GM12878) 108039854
chr12 57545685 57547828 ZBTB33 GTRD no Lung (A549) 108039855
chr12 57545691 57547646 ZNF274 GTRD no Blood (GM12878) 108039856
chr12 57545692 57547885 ZNF274 GTRD no Blood (GM12878) 108039857
chr12 57545712 57547503 ZNF143 GTRD no Epithelial (MCF-7) 108039858
chr12 57545728 57547906 ZNF274 GTRD no Bone Marrow (K562) 108039859
chr12 57545741 57547906 ZBTB33 GTRD no Lung (A549) 108039860
chr12 57545742 57546581 ZNF274 GTRD no Blood (GM12878) 108039861
chr12 57545757 57547438 TCF7L2 GTRD no Colon (HCT116) 108039862
chr12 57545757 57547582 ZNF274 GTRD no Blood (GM12878) 108039863
chr12 57545767 57547443 ZNF274 GTRD no Bone Marrow (K562) 108039864
chr12 57545767 57548047 ZNF274 GTRD no Bone Marrow (K562) 108039865
chr12 57545775 57547461 ZBTB33 GTRD no Lung (A549) 108039866
chr12 57545775 57547782 ZBTB33 GTRD no Lung (A549) 108039867
chr12 57545776 57547838 ZNF274 GTRD no Bone Marrow (K562) 108039868
chr12 57545781 57547915 ZNF274 GTRD no Blood (GM12878) 108039869
chr12 57545782 57547420 ZNF143 GTRD no Epithelial (MCF-7) 108039870
chr12 57545783 57547021 ZNF274 GTRD no Cervix (HeLa-S3) 108039871
chr12 57545792 57547505 ZNF274 GTRD no Bone Marrow (K562) 108039872
chr12 57545798 57548134 ZNF143 GTRD no Epithelial (MCF-7) 108039873
chr12 57545817 57547454 ZNF143 GTRD no Epithelial (MCF-7) 108039874
chr12 57545818 57547512 ZBTB33 GTRD no Lung (A549) 108039875
chr12 57545826 57547452 ZNF143 GTRD no Epithelial (MCF-7) 108039876
chr12 57545827 57547503 ZNF274 GTRD no Bone Marrow (K562) 108039877
chr12 57545835 57547650 ZNF274 GTRD no Bone Marrow (K562) 108039878
chr12 57545849 57546958 ZNF274 GTRD no Bone Marrow (K562) 108039879
chr12 57545849 57547474 ZNF274 GTRD no Blood (GM12878) 108039880
chr12 57545870 57547492 ZNF274 GTRD no Bone Marrow (K562) 108039881
chr12 57545872 57547555 ZNF274 GTRD no Bone Marrow (K562) 108039882
chr12 57545875 57547616 ZNF274 GTRD no Liver (HepG2) 108039883
chr12 57545878 57547810 ZBTB33 GTRD no Lung (A549) 108039884
chr12 57545890 57547871 ZBTB33 GTRD no Lung (A549) 108039885
chr12 57545899 57547639 ZBTB33 GTRD no Lung (A549) 108039886
chr12 57545899 57547650 ZNF274 GTRD no Bone Marrow (K562) 108039887
chr12 57545905 57547551 ZBTB33 GTRD no Lung (A549) 108039888
chr12 57545905 57547632 ZNF274 GTRD no Bone Marrow (K562) 108039889
chr12 57545914 57547612 ZNF274 GTRD no Liver (HepG2) 108039890
chr12 57545922 57546625 TCF7L2 GTRD no Colon (HCT116) 108039891
chr12 57545932 57546921 ZNF274 GTRD no Bone Marrow (K562) 108039892
chr12 57545932 57547901 ZBTB33 GTRD no Lung (A549) 108039893
chr12 57545940 57546613 ZBTB33 GTRD no Lung (A549) 108039894
chr12 57545945 57546884 ZNF274 GTRD no Bone Marrow (K562) 108039895
chr12 57545945 57547426 ZNF274 GTRD no Bone Marrow (K562) 108039896
chr12 57545948 57546927 ZBTB33 GTRD no Lung (A549) 108039897
chr12 57545949 57547458 ZNF143 GTRD no Epithelial (MCF-7) 108039898
chr12 57545949 57548076 ZBTB33 GTRD no Lung (A549) 108039899
chr12 57545971 57547584 ZNF274 GTRD no Liver (HepG2) 108039900
chr12 57545994 57547571 ZNF274 GTRD no Liver (HepG2) 108039901
chr12 57545996 57547295 ZNF274 GTRD no Bone Marrow (K562) 108039902
chr12 57545999 57546586 ZNF274 GTRD no Liver (HepG2) 108039903
chr12 57545999 57547516 ZNF274 GTRD no Bone Marrow (K562) 108039904
chr12 57545999 57547648 ZNF274 GTRD no Blood (GM12878) 108039905
chr12 57546006 57546909 ZNF274 GTRD no Cervix (HeLa-S3) 108039906
chr12 57546006 57548068 ZBTB33 GTRD no Lung (A549) 108039907
chr12 57546009 57546654 ZNF274 GTRD no Bone Marrow (K562) 108039908
chr12 57546020 57546736 ZBTB33 GTRD no Lung (A549) 108039909
Genes associated with rs78438401[chr12:57546022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 58017193 58027138 - B4GALNT1 ENSG00000135454.9 58027138 471171 Ovary 0.361075 12259