EnhancerDB
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  3. rs78439754[chr16:88856196]
Enhancers that have rs78439754[chr16:88856196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88855160 88863461 enh47985
Liver (HepG2) Blood (T-cell) Thymus Blood (OCI-LY7)
Transcript factors that have rs78439754[chr16:88856196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88855407 88858991 TCF7L2 GTRD no Colon (HCT116) 108223792
chr16 88855495 88857959 TCF7L2 GTRD no Colon (HCT116) 108223793
chr16 88855657 88858116 TCF7L2 GTRD no Colon (HCT116) 108223794
chr16 88855673 88859039 ZNF143 GTRD no Epithelial (MCF-7) 108223795
chr16 88855682 88858147 ZNF143 GTRD no Epithelial (MCF-7) 108223796
chr16 88855698 88858830 TCF7L2 GTRD no Colon (HCT116) 108223797
chr16 88855713 88858116 ZNF274 GTRD no Bone Marrow (K562) 108223798
chr16 88855716 88857915 TCF7L2 GTRD no Colon (HCT116) 108223799
chr16 88855719 88857995 TCF7L2 GTRD no Colon (HCT116) 108223800
chr16 88855808 88858008 TCF7L2 GTRD no Colon (HCT116) 108223801
chr16 88855831 88858469 ZNF274 GTRD no Bone Marrow (K562) 108223802
chr16 88855890 88857766 TCF7L2 GTRD no Colon (HCT116) 108223803
chr16 88855949 88857798 TCF7L2 GTRD no Colon (HCT116) 108223804
chr16 88855967 88856583 ZNF274 GTRD no Liver (HepG2) 21737258
chr16 88855977 88858730 ZNF143 GTRD no Epithelial (MCF-7) 108223805
chr16 88856055 88856578 ZNF274 GTRD no Liver (HepG2) 21737259
chr16 88856074 88858346 TCF7L2 GTRD no Colon (HCT116) 108223806
chr16 88856156 88857316 TCF7L2 GTRD no Colon (HCT116) 108223807
chr16 88856157 88857995 TCF7L2 GTRD no Colon (HCT116) 108223808
chr16 88856178 88858365 ZNF143 GTRD no Epithelial (MCF-7) 108223809
Genes associated with rs78439754[chr16:88856196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More