EnhancerDB
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  3. rs78465973[chr12:54189602]
Enhancers that have rs78465973[chr12:54189602]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54186005 54202829 enh80200
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs78465973[chr12:54189602]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54188051 54190510 ZNF143 GTRD no Epithelial (MCF-7) 21549657
chr12 54188081 54189966 ZNF143 GTRD no Epithelial (MCF-7) 21549658
chr12 54188250 54190215 ZNF274 GTRD no Cervix (HeLa-S3) 21549659
chr12 54188294 54190356 ZNF143 GTRD no Epithelial (MCF-7) 21549660
chr12 54188297 54189730 ZNF274 GTRD no Liver (HepG2) 21549661
chr12 54188308 54190438 ZNF274 GTRD no Cervix (HeLa-S3) 21549663
chr12 54188338 54189974 ZNF143 GTRD no Epithelial (MCF-7) 21549666
chr12 54188348 54189693 ZNF143 GTRD no Epithelial (MCF-7) 21549667
chr12 54188436 54189817 ZNF274 GTRD no Liver (HepG2) 21549668
chr12 54188439 54189677 ZNF274 GTRD no Cervix (HeLa-S3) 21549669
chr12 54188445 54189755 ZNF274 GTRD no Liver (HepG2) 21549670
chr12 54188465 54189618 ZNF274 GTRD no Liver (HepG2) 21549673
chr12 54188465 54190205 ZNF274 GTRD no Cervix (HeLa-S3) 21549674
chr12 54188540 54189772 ZNF274 GTRD no Liver (HepG2) 21549682
chr12 54188574 54189748 ZNF143 GTRD no Epithelial (MCF-7) 21549689
chr12 54188665 54189626 ZNF274 GTRD no Liver (HepG2) 21549697
Genes associated with rs78465973[chr12:54189602], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More