EnhancerDB
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  3. rs78602716[chr11:5448989]
Enhancers that have rs78602716[chr11:5448989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 5444338 5461457 enh86051
Colon (HCT116)
Transcript factors that have rs78602716[chr11:5448989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 5448981 5448991 ALX3 JASPAR yes 37110487
chr11 5448981 5448991 EMX1 JASPAR yes 37110488
chr11 5448981 5448991 EMX2 JASPAR yes 37110489
chr11 5448981 5448991 EVX2 JASPAR yes 37110490
chr11 5448981 5448991 GSX2 JASPAR yes 37110491
chr11 5448981 5448991 HOXB2 JASPAR yes 37110492
chr11 5448981 5448991 HOXB3 JASPAR yes 37110493
chr11 5448981 5448991 MEOX1 JASPAR yes 37110494
chr11 5448981 5448991 MEOX2 JASPAR yes 37110495
chr11 5448981 5448991 MIXL1 JASPAR yes 37110496
chr11 5448981 5448991 MNX1 JASPAR yes 37110497
chr11 5448981 5448991 RAX JASPAR yes 37110498
chr11 5448981 5448992 HOXA10 JASPAR yes 37110499
chr11 5448982 5448990 LMX1A JASPAR yes 37110500
chr11 5448982 5448990 LMX1B JASPAR yes 37110501
chr11 5448982 5448990 NKX6-1 JASPAR yes 37110502
chr11 5448982 5448990 NKX6-2 JASPAR yes 37110503
chr11 5448982 5448990 PDX1 JASPAR yes 37110504
chr11 5448982 5448990 VAX1 JASPAR yes 37110505
chr11 5448982 5448990 VAX2 JASPAR yes 37110506
chr11 5448982 5448990 VSX1 JASPAR yes 37110507
chr11 5448982 5448992 HOXD13 JASPAR yes 37110508
Genes associated with rs78602716[chr11:5448989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More