EnhancerDB
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  3. rs78769622[chr12:53398467]
Enhancers that have rs78769622[chr12:53398467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53398446 53398634 vista13511
VISTA
Transcript factors that have rs78769622[chr12:53398467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53397525 53398555 TCF7L2 GTRD no Colon (HCT116) 108035499
chr12 53398238 53398848 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035500
chr12 53398382 53398672 USF2 UCSC Txn Factor no Conserved 108035501
chr12 53398382 53398672 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035502
chr12 53398393 53398657 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108035503
chr12 53398394 53398668 USF1 UCSC Txn Factor no Conserved 108035504
chr12 53398405 53398669 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035505
chr12 53398415 53398671 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035506
chr12 53398416 53398639 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035507
chr12 53398418 53398668 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108035508
chr12 53398440 53398629 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108035509
chr12 53398442 53398642 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108035510
chr12 53398452 53398636 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035511
Genes associated with rs78769622[chr12:53398467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More