EnhancerDB
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  3. rs78859769[chr10:97517905]
Enhancers that have rs78859769[chr10:97517905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 97512885 97520715 enh1434
Placenta Peripheral Blood (MM.1S) Blood (Karpas-422)
Transcript factors that have rs78859769[chr10:97517905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 97515162 97520631 POLR2A UCSC Txn Factor no Conserved 107933338
chr10 97515162 97520631 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107933339
chr10 97515646 97518505 TCF7L2 GTRD no Colon (HCT116) 107933340
chr10 97516941 97518731 TCF7L2 GTRD no Colon (HCT116) 107933341
chr10 97517257 97518637 ZNF143 GTRD no Epithelial (MCF-7) 107933342
chr10 97517269 97518579 ZNF143 GTRD no Epithelial (MCF-7) 107933343
chr10 97517286 97518603 TCF7L2 GTRD no Colon (HCT116) 107933344
chr10 97517646 97518679 TCF7L2 GTRD no Colon (HCT116) 107933345
chr10 97517823 97518714 ZNF143 GTRD no Epithelial (MCF-7) 107933346
chr10 97517827 97519009 ZNF274 GTRD no Cervix (HeLa-S3) 107933347
chr10 97517833 97518855 ZNF274 GTRD no Cervix (HeLa-S3) 107933348
chr10 97517893 97517911 IRF2 JASPAR yes 129307426
chr10 97517894 97517915 IRF1 JASPAR yes 129307427
chr10 97517896 97517911 STAT2 JASPAR yes 129307428
chr10 97517897 97517911 STAT1 JASPAR yes 129307429
chr10 97517898 97517910 IRF1 JASPAR yes 129307430
Genes associated with rs78859769[chr10:97517905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr10 96997329 97050781 - PDLIM1 ENSG00000107438.4 97050781 467124 Spleen 0.314936 10049