EnhancerDB
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  3. rs79254452[chr2:231838859]
Enhancers that have rs79254452[chr2:231838859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 231832125 231854193 enh6196
Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Pancreas (Panc1) Muscle (Myotube) Thymus
chr2 231838825 231839283 vista35128
VISTA
Transcript factors that have rs79254452[chr2:231838859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 231838691 231839657 NFIC UCSC Txn Factor no Conserved 108435641
chr2 231838758 231839389 RELA UCSC Txn Factor no Conserved 108435642
chr2 231838783 231839664 RUNX3 UCSC Txn Factor no Conserved 108435643
chr2 231838800 231839524 FOXM1 UCSC Txn Factor no Conserved 108435644
chr2 231838802 231839558 ATF2 UCSC Txn Factor no Conserved 108435645
chr2 231838821 231839353 BCL3 UCSC Txn Factor no Conserved 108435646
chr2 231838859 231838869 EMX1 JASPAR yes 22227584
chr2 231838859 231838869 EMX2 JASPAR yes 22227585
chr2 231838859 231838869 EN2 JASPAR yes 22227586
chr2 231838859 231838869 EVX1 JASPAR yes 22227587
chr2 231838859 231838869 EVX2 JASPAR yes 22227588
chr2 231838859 231838869 GBX1 JASPAR yes 22227589
chr2 231838859 231838869 GSX1 JASPAR yes 22227590
chr2 231838859 231838869 GSX2 JASPAR yes 22227591
chr2 231838859 231838869 HOXA2 JASPAR yes 22227592
chr2 231838859 231838869 HOXB2 JASPAR yes 22227593
chr2 231838859 231838869 HOXB3 JASPAR yes 22227594
chr2 231838859 231838869 MEOX1 JASPAR yes 22227595
chr2 231838859 231838869 MEOX2 JASPAR yes 22227596
chr2 231838859 231838869 MIXL1 JASPAR yes 22227597
chr2 231838859 231838869 EMX1 JASPAR yes 81692293
chr2 231838859 231838869 EMX2 JASPAR yes 81692294
chr2 231838859 231838869 EN2 JASPAR yes 81692295
chr2 231838859 231838869 EVX1 JASPAR yes 81692296
chr2 231838859 231838869 EVX2 JASPAR yes 81692297
chr2 231838859 231838869 GBX1 JASPAR yes 81692298
chr2 231838859 231838869 GSX1 JASPAR yes 81692299
chr2 231838859 231838869 GSX2 JASPAR yes 81692300
chr2 231838859 231838869 HOXA2 JASPAR yes 81692301
chr2 231838859 231838869 HOXB2 JASPAR yes 81692302
chr2 231838859 231838869 HOXB3 JASPAR yes 81692303
chr2 231838859 231838869 MEOX1 JASPAR yes 81692304
chr2 231838859 231838869 MEOX2 JASPAR yes 81692305
chr2 231838859 231838869 MIXL1 JASPAR yes 81692306
Genes associated with rs79254452[chr2:231838859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More