Enhancers that have rs7939541[chr11:9590389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 9590279 9590748 vista9572

Transcript factors that have rs7939541[chr11:9590389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 9590099 9591259 POLR2A UCSC Txn Factor no Conserved 107955962
chr11 9590282 9590778 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107955963
chr11 9590316 9591710 ZBTB33 GTRD no Lung (A549) 107955964
chr11 9590336 9590638 SOX2 GTRD no Neural Stem Cells (H9) 107955965
chr11 9590338 9590662 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107955966
chr11 9590346 9590876 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107955967
chr11 9590347 9590747 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107955968
chr11 9590372 9590702 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107955969
chr11 9590372 9590712 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107955970
chr11 9590375 9590750 SOX2 GTRD no Neural Stem Cells (H9) 107955971
chr11 9590378 9590397 RFX2 JASPAR yes 114038106
chr11 9590380 9590395 RFX5 JASPAR yes 114038108
chr11 9590383 9590392 NFIX JASPAR yes 114038109
chr11 9590383 9590899 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107955972
chr11 9590385 9590391 NFIC JASPAR yes 114038110
chr11 9590389 9590394 ETS2 TRANSFAC yes 114038111
chr11 9590389 9590397 EHF JASPAR yes 114038112

Genes associated with rs7939541[chr11:9590389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More