EnhancerDB
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  3. rs796099598[chr19:3554467]
Enhancers that have rs796099598[chr19:3554467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3550863 3556635 enh4966
Blood (OCI-LY7) Blood (T-cell) Thymus Blood (Karpas-422)
Transcript factors that have rs796099598[chr19:3554467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3553960 3555276 ZNF274 GTRD no Blood (GM12878) 108367821
chr19 3554038 3559185 ZNF274 GTRD no Cervix (HeLa-S3) 21839629
chr19 3554038 3559185 ZNF274 GTRD no Cervix (HeLa-S3) 108367822
chr19 3554051 3555406 ZNF274 GTRD no Blood (GM12878) 108367823
chr19 3554123 3555228 STAT3 GTRD no Blood (OCI-LY7) 21839630
chr19 3554123 3555228 STAT3 GTRD no Blood (OCI-LY7) 108367824
chr19 3554192 3555364 ZNF274 GTRD no Cervix (HeLa-S3) 108367825
chr19 3554447 3554468 IRF1 JASPAR yes 112138933
chr19 3554448 3554469 IRF1 JASPAR yes 112138935
chr19 3554449 3554470 IRF1 JASPAR yes 112138937
chr19 3554452 3554467 FOXP1 JASPAR yes 112138939
chr19 3554453 3554474 IRF1 JASPAR yes 112138940
chr19 3554454 3554469 FOXP1 JASPAR yes 112138941
chr19 3554457 3554471 SPIC JASPAR yes 112138942
chr19 3554457 3554471 STAT1 JASPAR yes 112138943
chr19 3554457 3554472 PRDM1 JASPAR yes 112138944
chr19 3554457 3554472 STAT2 JASPAR yes 112138945
chr19 3554457 3554478 IRF1 JASPAR yes 112138946
chr19 3554461 3554476 PRDM1 JASPAR yes 112138947
Genes associated with rs796099598[chr19:3554467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 4229495 4237528 + EBI3 ENSG00000105246.5 4229495 675028 Pancreas 0.145097 16833