-
Home
- SNP
- rs80117542[chr12:107363806]
Enhancers that have rs80117542[chr12:107363806]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
107363542 |
107363991 |
vista14775 |
|
|
Transcript factors that have rs80117542[chr12:107363806]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
107363636
|
107364291
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108056141
|
|
|
chr12
|
107363733
|
107364538
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108056142
|
|
|
chr12
|
107363790
|
107363808
|
RARA
|
JASPAR
|
yes
|
|
82471427
|
|
|
chr12
|
107363799
|
107364084
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108056143
|
|
|
chr12
|
107363801
|
107363811
|
NKX2-3
|
JASPAR
|
yes
|
|
82471429
|
|
|
chr12
|
107363802
|
107363810
|
ISL2
|
JASPAR
|
yes
|
|
82471430
|
|
|
chr12
|
107363802
|
107363811
|
NKX3-2
|
JASPAR
|
yes
|
|
82471431
|
|
|
chr12
|
107363804
|
107363814
|
TBR1
|
JASPAR
|
yes
|
|
82471432
|
|
|
chr12
|
107363805
|
107364005
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
108056144
|
|
Genes associated with rs80117542[chr12:107363806], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |