EnhancerDB
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  3. rs80282309[chr1:154324365]
Enhancers that have rs80282309[chr1:154324365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154322025 154329335 enh49982
Cervix (HeLa-S3) Large Intestine Epithelial (MCF-7)
Transcript factors that have rs80282309[chr1:154324365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154323992 154325853 ZNF143 GTRD no Epithelial (MCF-7) 21340214
chr1 154324010 154327014 ZNF143 GTRD no Epithelial (MCF-7) 21340215
chr1 154324070 154325284 ZNF274 GTRD no Cervix (HeLa-S3) 21340216
chr1 154324074 154325487 ZNF143 GTRD no Epithelial (MCF-7) 21340217
chr1 154324116 154327580 ZNF143 GTRD no Epithelial (MCF-7) 21340218
chr1 154324134 154325277 ZNF143 GTRD no Epithelial (MCF-7) 21340219
chr1 154324147 154325343 ZNF143 GTRD no Epithelial (MCF-7) 21340220
chr1 154324156 154325390 ZNF143 GTRD no Epithelial (MCF-7) 21340221
chr1 154324166 154325332 ZNF143 GTRD no Epithelial (MCF-7) 21340222
chr1 154324169 154326906 ZNF143 GTRD no Epithelial (MCF-7) 21340223
chr1 154324196 154324569 ZNF143 GTRD no Epithelial (MCF-7) 21340224
chr1 154324196 154325014 ZNF274 GTRD no Cervix (HeLa-S3) 21340225
chr1 154324323 154324992 ZNF274 GTRD no Cervix (HeLa-S3) 21340226
chr1 154324356 154324371 TFAP2C JASPAR yes 32285644
chr1 154324357 154324368 GCM1 JASPAR yes 32285645
chr1 154324359 154324370 TFAP2B JASPAR yes 32285646
Genes associated with rs80282309[chr1:154324365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 154934774 154946871 - SHC1 ENSG00000160691.14 154946871 610409 Esophagus 0.280681 1311