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- rs828909[chr2:216975305]
Enhancers that have rs828909[chr2:216975305]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr2 |
216972825 |
216980515 |
enh6149 |
|
|
Transcript factors that have rs828909[chr2:216975305]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr2
|
216975299
|
216975317
|
IRF2
|
JASPAR
|
yes
|
|
80835813
|
|
|
chr2
|
216975300
|
216975321
|
IRF1
|
JASPAR
|
yes
|
|
80835814
|
|
|
chr2
|
216975302
|
216975317
|
PRDM1
|
JASPAR
|
yes
|
|
80835815
|
|
|
chr2
|
216975302
|
216975317
|
STAT2
|
JASPAR
|
yes
|
|
80835816
|
|
|
chr2
|
216975303
|
216975317
|
STAT1
|
JASPAR
|
yes
|
|
80835817
|
|
|
chr2
|
216975304
|
216975318
|
IRF7
|
JASPAR
|
yes
|
|
80835818
|
|
|
chr2
|
216975304
|
216975318
|
IRF8
|
JASPAR
|
yes
|
|
80835819
|
|
|
chr2
|
216975304
|
216975319
|
IRF9
|
JASPAR
|
yes
|
|
80835820
|
|
Genes associated with rs828909[chr2:216975305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr2
|
216972187
|
217071026
|
+
|
XRCC5
|
ENSG00000079246.11
|
216972187
|
0
|
Stomach
|
0.250821
|
3121
|
|