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- rs9549534[chr13:113180038]
Enhancers that have rs9549534[chr13:113180038]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr13 |
113179985 |
113180373 |
vista17112 |
|
|
Transcript factors that have rs9549534[chr13:113180038]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr13
|
113179398
|
113180146
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108090437
|
|
|
chr13
|
113179408
|
113180088
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108090438
|
|
|
chr13
|
113180034
|
113180045
|
CDX2
|
JASPAR
|
yes
|
|
19345820
|
|
|
chr13
|
113180034
|
113180049
|
FOXP1
|
JASPAR
|
yes
|
|
19345821
|
|
|
chr13
|
113180035
|
113180046
|
FOXH1
|
JASPAR
|
yes
|
|
19345822
|
|
|
chr13
|
113180035
|
113180046
|
HOXA10
|
JASPAR
|
yes
|
|
19345823
|
|
|
chr13
|
113180036
|
113180045
|
CDX1
|
JASPAR
|
yes
|
|
19345824
|
|
|
chr13
|
113180036
|
113180046
|
HOXA13
|
JASPAR
|
yes
|
|
19345825
|
|
|
chr13
|
113180036
|
113180046
|
HOXB13
|
JASPAR
|
yes
|
|
19345826
|
|
|
chr13
|
113180036
|
113180046
|
HOXD13
|
JASPAR
|
yes
|
|
19345827
|
|
|
chr13
|
113180037
|
113180048
|
FOXP2
|
JASPAR
|
yes
|
|
19345828
|
|
|
chr13
|
113180037
|
113180049
|
FOXI1
|
JASPAR
|
yes
|
|
19345829
|
|
Genes associated with rs9549534[chr13:113180038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |