EnhancerDB
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  3. rs9549607[chr13:113597544]
Enhancers that have rs9549607[chr13:113597544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113592512 113599995 enh15513
Brain (SK-N-SH) Lung Blood (OCI-LY7) Placenta Muscle (Myotube)
Transcript factors that have rs9549607[chr13:113597544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113596796 113598102 TCF7L2 GTRD no Colon (HCT116) 108090817
chr13 113596911 113598163 TCF7L2 GTRD no Colon (HCT116) 108090818
chr13 113597244 113597568 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108090868
chr13 113597251 113597581 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108090869
chr13 113597275 113597862 ZNF143 GTRD no Epithelial (MCF-7) 108090870
chr13 113597542 113597551 SNAI2 JASPAR yes 60444715
chr13 113597542 113597552 FIGLA JASPAR yes 60444716
chr13 113597542 113597552 TCF3 JASPAR yes 60444717
chr13 113597542 113597552 TCF4 JASPAR yes 60444718
chr13 113597544 113597553 ZEB1 JASPAR yes 60444719
Genes associated with rs9549607[chr13:113597544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr13 114239013 114295785 + TFDP1 ENSG00000198176.8 114239013 641469 Liver 0.321459 13047