EnhancerDB
  1. Home
  2. SNP
  3. rs9926609[chr16:3540962]
Enhancers that have rs9926609[chr16:3540962]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3536293 3543388 enh44231
Muscle (Myotube) Lung (PC-9)
Transcript factors that have rs9926609[chr16:3540962]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3540958 3540973 FOXA1 JASPAR yes 9217708
chr16 3540958 3540979 MAFG JASPAR yes 9217709
chr16 3540960 3540971 FOXP2 JASPAR yes 9217710
chr16 3540960 3540972 FOXC2 JASPAR yes 9217711
chr16 3540960 3540974 FOXF2 JASPAR yes 9217712
chr16 3540961 3540969 FOXD1 JASPAR yes 9217713
chr16 3540961 3540969 FOXG1 JASPAR yes 9217714
chr16 3540961 3540969 FOXO3 JASPAR yes 9217715
chr16 3540961 3540972 FOXB1 JASPAR yes 9217716
chr16 3540961 3540972 FOXC1 JASPAR yes 9217717
chr16 3540962 3540969 FOXD2 JASPAR yes 9217718
chr16 3540962 3540969 FOXI1 JASPAR yes 9217719
chr16 3540962 3540969 FOXL1 JASPAR yes 9217720
chr16 3540962 3540969 FOXO4 JASPAR yes 9217721
chr16 3540962 3540969 FOXO6 JASPAR yes 9217722
chr16 3540962 3540969 FOXP3 JASPAR yes 9217723
chr16 3540962 3540973 FOXA1 JASPAR yes 9217724
Genes associated with rs9926609[chr16:3540962], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 3493611 3536963 + NAA60 ENSG00000122390.13 3493611 3999 Esophagus 4.57372e-11 14484
chr16 3493611 3536963 + NAA60 ENSG00000122390.13 3493611 3999 Breast 2.88458e-08 14484
chr16 3493611 3536963 + NAA60 ENSG00000122390.13 3493611 3999 Ovary 0.060402 14484
chr16 3493611 3536963 + NAA60 ENSG00000122390.13 3493611 3999 Lung 2.55476e-15 14484